Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Amino Sugar Metabolic Process (GO:0006040) Genes Targeted by hsa-mir-606 in MPM Mesothelioma Gordon Cluster 52 Table contains all genes in the MPM Mesothelioma Gordon cluster number 52. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-606 GO:0006040 55251 PCMTD2 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:15882] T 79852 EPHX3 epoxide hydrolase 3 [Source:HGNC Symbol;Acc:23760] zzz999 7436 VLDLR very low density lipoprotein receptor [Source:HGNC Symbol;Acc:12698] zzz999 26354 GNL3 guanine nucleotide binding protein-like 3 (nucleolar) [Source:HGNC Symbol;Acc:29931] T 54700 RRN3 RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:30346] T 10544 PROCR protein C receptor, endothelial [Source:HGNC Symbol;Acc:9452] zzz999 26232 FBXO2 F-box protein 2 [Source:HGNC Symbol;Acc:13581] zzz999 55596 ZCCHC8 zinc finger, CCHC domain containing 8 [Source:HGNC Symbol;Acc:25265] zzz999 10039 PARP3 poly (ADP-ribose) polymerase family, member 3 [Source:HGNC Symbol;Acc:273] zzz999 64769 MEAF6 MYST/Esa1-associated factor 6 [Source:HGNC Symbol;Acc:25674] T 2246 FGF1 fibroblast growth factor 1 (acidic) [Source:HGNC Symbol;Acc:3665] zzz999 51110 LACTB2 lactamase, beta 2 [Source:HGNC Symbol;Acc:18512] zzz999 5742 PTGS1 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) [Source:HGNC Symbol;Acc:9604] zzz999 8630 HSD17B6 hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse) [Source:HGNC Symbol;Acc:23316] zzz999 54583 EGLN1 egl nine homolog 1 (C. elegans) [Source:HGNC Symbol;Acc:1232] zzz999 79048 SECISBP2 SECIS binding protein 2 [Source:HGNC Symbol;Acc:30972] zzz999 8228 PNPLA4 patatin-like phospholipase domain containing 4 [Source:HGNC Symbol;Acc:24887] T 54872 PIGG phosphatidylinositol glycan anchor biosynthesis, class G [Source:HGNC Symbol;Acc:25985] zzz999 23338 PHF15 PHD finger protein 15 [Source:HGNC Symbol;Acc:22984] zzz999 3093 UBE2K ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast) [Source:HGNC Symbol;Acc:4914] zzz999 29088 MRPL15 mitochondrial ribosomal protein L15 [Source:HGNC Symbol;Acc:14054] zzz999 23095 KIF1B kinesin family member 1B [Source:HGNC Symbol;Acc:16636] T 2626 GATA4 GATA binding protein 4 [Source:HGNC Symbol;Acc:4173] zzz999 2135 EXTL2 exostoses (multiple)-like 2 [Source:HGNC Symbol;Acc:3516] zzz999 Yes 894 CCND2 cyclin D2 [Source:HGNC Symbol;Acc:1583] P T 7482 WNT2B wingless-type MMTV integration site family, member 2B [Source:HGNC Symbol;Acc:12781] zzz999 708 C1QBP complement component 1, q subcomponent binding protein [Source:HGNC Symbol;Acc:1243] zzz999 4837 NNMT nicotinamide N-methyltransferase [Source:HGNC Symbol;Acc:7861] zzz999 130 ADH6 alcohol dehydrogenase 6 (class V) [Source:HGNC Symbol;Acc:255] zzz999 5236 PGM1 phosphoglucomutase 1 [Source:HGNC Symbol;Acc:8905] zzz999 57149 LYRM1 LYR motif containing 1 [Source:HGNC Symbol;Acc:25074] zzz999 11163 NUDT4 nudix (nucleoside diphosphate linked moiety X)-type motif 4 [Source:HGNC Symbol;Acc:8051] T 79364 ZXDC ZXD family zinc finger C [Source:HGNC Symbol;Acc:28160] T 224 ALDH3A2 aldehyde dehydrogenase 3 family, member A2 [Source:HGNC Symbol;Acc:403] zzz999 57209 ZNF248 zinc finger protein 248 [Source:HGNC Symbol;Acc:13041] zzz999 9732 DOCK4 dedicator of cytokinesis 4 [Source:HGNC Symbol;Acc:19192] zzz999 5122 PCSK1 proprotein convertase subtilisin/kexin type 1 [Source:HGNC Symbol;Acc:8743] zzz999 5281 PIGF phosphatidylinositol glycan anchor biosynthesis, class F [Source:HGNC Symbol;Acc:8962] T 54505 DHX29 DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Source:HGNC Symbol;Acc:15815] zzz999 4501 MT1X metallothionein 1X [Source:HGNC Symbol;Acc:7405] zzz999 23768 FLRT2 fibronectin leucine rich transmembrane protein 2 [Source:HGNC Symbol;Acc:3761] T 51115 FAM82B family with sequence similarity 82, member B [Source:HGNC Symbol;Acc:24285] T 64116 SLC39A8 solute carrier family 39 (zinc transporter), member 8 [Source:HGNC Symbol;Acc:20862] zzz999 6059 ABCE1 ATP-binding cassette, sub-family E (OABP), member 1 [Source:HGNC Symbol;Acc:69] zzz999 55617 TASP1 taspase, threonine aspartase, 1 [Source:HGNC Symbol;Acc:15859] T 6567 SLC16A2 solute carrier family 16, member 2 (monocarboxylic acid transporter 8) [Source:HGNC Symbol;Acc:10923] T 4920 ROR2 receptor tyrosine kinase-like orphan receptor 2 [Source:HGNC Symbol;Acc:10257] zzz999 10581 IFITM2 interferon induced transmembrane protein 2 (1-8D) [Source:HGNC Symbol;Acc:5413] zzz999 23236 PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) [Source:HGNC Symbol;Acc:15917] zzz999 26268 FBXO9 F-box protein 9 [Source:HGNC Symbol;Acc:13588] zzz999 10276 NET1 neuroepithelial cell transforming 1 [Source:HGNC Symbol;Acc:14592] P T 55745 MUDENG MU-2/AP1M2 domain containing, death-inducing [Source:HGNC Symbol;Acc:20192] zzz999 7553 ZNF7 zinc finger protein 7 [Source:HGNC Symbol;Acc:13139] zzz999 55755 CDK5RAP2 CDK5 regulatory subunit associated protein 2 [Source:HGNC Symbol;Acc:18672] zzz999 3572 IL6ST interleukin 6 signal transducer (gp130, oncostatin M receptor) [Source:HGNC Symbol;Acc:6021] T 10463 SLC30A9 solute carrier family 30 (zinc transporter), member 9 [Source:HGNC Symbol;Acc:1329] T 10196 PRMT3 protein arginine methyltransferase 3 [Source:HGNC Symbol;Acc:30163] zzz999 4489 MT1A metallothionein 1A [Source:HGNC Symbol;Acc:7393] zzz999 80014 WWC2 WW and C2 domain containing 2 [Source:HGNC Symbol;Acc:24148] T 23158 TBC1D9 TBC1 domain family, member 9 (with GRAM domain) [Source:HGNC Symbol;Acc:21710] zzz999 23341 DNAJC16 DnaJ (Hsp40) homolog, subfamily C, member 16 [Source:HGNC Symbol;Acc:29157] zzz999 8974 P4HA2 prolyl 4-hydroxylase, alpha polypeptide II [Source:HGNC Symbol;Acc:8547] zzz999 9945 GFPT2 glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:4242] T Yes 26227 PHGDH phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:8923] zzz999 2952 GSTT1 glutathione S-transferase theta 1 [Source:HGNC Symbol;Acc:4641] zzz999 6584 SLC22A5 solute carrier family 22 (organic cation/carnitine transporter), member 5 [Source:HGNC Symbol;Acc:10969] zzz999 10447 FAM3C family with sequence similarity 3, member C [Source:HGNC Symbol;Acc:18664] zzz999 394 ARHGAP5 Rho GTPase activating protein 5 [Source:HGNC Symbol;Acc:675] T 5283 PIGH phosphatidylinositol glycan anchor biosynthesis, class H [Source:HGNC Symbol;Acc:8964] zzz999 23677 SH3BP4 SH3-domain binding protein 4 [Source:HGNC Symbol;Acc:10826] zzz999 5771 PTPN2 protein tyrosine phosphatase, non-receptor type 2 [Source:HGNC Symbol;Acc:9650] T 1665 DHX15 DEAH (Asp-Glu-Ala-His) box polypeptide 15 [Source:HGNC Symbol;Acc:2738] P T 55686 MREG melanoregulin [Source:HGNC Symbol;Acc:25478] zzz999 64087 MCCC2 methylcrotonoyl-CoA carboxylase 2 (beta) [Source:HGNC Symbol;Acc:6937] zzz999 10164 CHST4 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4 [Source:HGNC Symbol;Acc:1972] zzz999 Yes 7022 TFAP2C transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) [Source:HGNC Symbol;Acc:11744] zzz999 9950 GOLGA5 golgin A5 [Source:HGNC Symbol;Acc:4428] zzz999 79959 CEP76 centrosomal protein 76kDa [Source:HGNC Symbol;Acc:25727] T 5162 PDHB pyruvate dehydrogenase (lipoamide) beta [Source:HGNC Symbol;Acc:8808] zzz999 7164 TPD52L1 tumor protein D52-like 1 [Source:HGNC Symbol;Acc:12006] zzz999 3268 AGFG2 ArfGAP with FG repeats 2 [Source:HGNC Symbol;Acc:5177] zzz999 10630 PDPN podoplanin [Source:HGNC Symbol;Acc:29602] zzz999 8634 RTCD1 RNA terminal phosphate cyclase domain 1 [Source:HGNC Symbol;Acc:17981] zzz999 22921 MSRB2 methionine sulfoxide reductase B2 [Source:HGNC Symbol;Acc:17061] zzz999 56648 EIF5A2 eukaryotic translation initiation factor 5A2 [Source:HGNC Symbol;Acc:3301] T 5274 SERPINI1 serpin peptidase inhibitor, clade I (neuroserpin), member 1 [Source:HGNC Symbol;Acc:8943] zzz999 55791 LRIF1 ligand dependent nuclear receptor interacting factor 1 [Source:HGNC Symbol;Acc:30299] zzz999 3426 CFI complement factor I [Source:HGNC Symbol;Acc:5394] zzz999 9655 SOCS5 suppressor of cytokine signaling 5 [Source:HGNC Symbol;Acc:16852] T 79886 C9orf82 chromosome 9 open reading frame 82 [Source:HGNC Symbol;Acc:25834] zzz999 8050 PDHX pyruvate dehydrogenase complex, component X [Source:HGNC Symbol;Acc:21350] T 55930 MYO5C myosin VC [Source:HGNC Symbol;Acc:7604] zzz999 26277 TINF2 TERF1 (TRF1)-interacting nuclear factor 2 [Source:HGNC Symbol;Acc:11824] T 7490 WT1 Wilms tumor 1 [Source:HGNC Symbol;Acc:12796] zzz999 10466 COG5 component of oligomeric golgi complex 5 [Source:HGNC Symbol;Acc:14857] zzz999 8723 SNX4 sorting nexin 4 [Source:HGNC Symbol;Acc:11175] zzz999 55188 RIC8B resistance to inhibitors of cholinesterase 8 homolog B (C. elegans) [Source:HGNC Symbol;Acc:25555] zzz999 1982 EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 [Source:HGNC Symbol;Acc:3297] zzz999 10402 ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:HGNC Symbol;Acc:18080] zzz999 Yes 4036 LRP2 low density lipoprotein receptor-related protein 2 [Source:HGNC Symbol;Acc:6694] T 54014 BRWD1 bromodomain and WD repeat domain containing 1 [Source:HGNC Symbol;Acc:12760] T 56985 C17orf48 chromosome 17 open reading frame 48 [Source:HGNC Symbol;Acc:30925] zzz999 54955 C1orf109 chromosome 1 open reading frame 109 [Source:HGNC Symbol;Acc:26039] zzz999 6675 UAP1 UDP-N-acteylglucosamine pyrophosphorylase 1 [Source:HGNC Symbol;Acc:12457] zzz999 Yes 2805 GOT1 glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1) [Source:HGNC Symbol;Acc:4432] T 5096 PCCB propionyl CoA carboxylase, beta polypeptide [Source:HGNC Symbol;Acc:8654] zzz999 8573 CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) [Source:HGNC Symbol;Acc:1497] zzz999 2053 EPHX2 epoxide hydrolase 2, cytoplasmic [Source:HGNC Symbol;Acc:3402] zzz999 4045 LSAMP limbic system-associated membrane protein [Source:HGNC Symbol;Acc:6705] zzz999 55351 STK32B serine/threonine kinase 32B [Source:HGNC Symbol;Acc:14217] zzz999 55629 PNRC2 proline-rich nuclear receptor coactivator 2 [Source:HGNC Symbol;Acc:23158] zzz999 51287 CHCHD8 coiled-coil-helix-coiled-coil-helix domain containing 8 [Source:HGNC Symbol;Acc:24604] zzz999 54205 CYCS cytochrome c, somatic [Source:HGNC Symbol;Acc:19986] zzz999

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